PUBLICATIONS
Kyoda, K., Adachi, E., Masuda, E., Nagai, Y., Suzuki, Y., Oguro, T., Urai, M., Arai, R., Furukawa, M., Shimada, K., Kuramochi, J., Nagai, E., and Onami, S. (2012). WDDD: Worm Developmental Dynamics Database. Nucleic Acids Res. doi: 10.1093/nar/gks1107 First published online: November 20. [Open Access]
Hamahashi, S., Kitano, H., and Onami, S. (2007). A system for measuring cell division patterns of early Caenorhabditis elegans embryos by using image processing and object tracking. Systems Comput. Jpn. 38(11), 12-24.
Hamahashi, S., and Onami, S. (2005). Objective measurement of spindle orientation in early Caenorhabditis elegans. Genome Inform. 16, 86-93. [Pubmed][Open Access]
Hamahashi, S., Onami, S., and Kitano, H. (2005). Detection of nuclei in 4D Nomarski microscope images of early Caenorhabditis elegans embryos using local image entropy and object tracking. BMC Bioinformatics 6, 125. [PubMed][Open Access]
Onami, S., Hamahashi, S., Nagasaki, M., Miyano, S., and Kitano, H. (2001). Automatic acquisition of cell lineage through 4D microscope and analysis of early C. elegans embryogenesis. In Foundations of Sysmtes Biology, H. Kitano, ed (Cambridge, MA: MIT Press), pp. 39-55.
Yasuda, T., Bannai, H., Onami, S., Miyano, S., and Kitano, H. (1999). Towards automatic construction of cell-lineage of C. elegans from Nomarski DIC microscope images. Genome Inform. 10, 144-154. [PubMed][Open Access]
RECENT PRESENTATIONS AT CONFERENCES (selected)
Kyoda, K., Adachi, E., Arai, R., and Onami, S.: Objective phenotype analysis using quantitative cell division patterns. The 16th International C. elegans Meeting. Los Angeles, USA, Jun 27-Jul 1, 2007. [Abstract]
Maeda, T.T., Kimura, A., Kyoda, K., and Onami, S.: Development of nuclear tracking system for processing DIC microscope images of various image qualities.: The 16th International C. elegans Meeting. Los Angeles, USA, Jun 27-Jul 1, 2007. [Abstract]